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  5. XM_003058166.1

XM_003058166.1 (MicpuC2_15932, 15932)


Aliases : MicpuC2_15932, 15932

Description : ATP-binding cassette superfamily


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003058166.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre17.g734612 30781956, MRP2 ABC transporter C family member 14 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD41487 No alias ABC transporter type 1, transmembrane domain; ABC... 0.04 OrthoFinder
PTI_10G02780.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Sro2938_g340630.1 Contig1091.g10559 Oligomycin resistance ATP-dependent permease YOR1 0.02 OrthoFinder
Sro59_g034040.1 Contig571.g7250 Oligomycin resistance ATP-dependent permease YOR1 0.02 OrthoFinder
TP04G05700.1 No alias ABC transporter-like; ABC transporter type 1,... 0.04 OrthoFinder
TP04G07990.1 No alias ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
Transcript_contig_78893 78893 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 381 524
IPR003439 ABC_transporter-like_ATP-bd 1063 1211
IPR011527 ABC1_TM_dom 731 966
IPR011527 ABC1_TM_dom 45 320
No external refs found!