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  5. XM_003057924.1

XM_003057924.1 (MicpuC2_26131, 26131)


Aliases : MicpuC2_26131, 26131

Description : Ribosomal protein L18e/L15P [Interproscan].


Gene families : OG_01_0002680 (OrthoFinder) Phylogenetic Tree(s): OG0002680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003057924.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cre02.g115200 30785578, RPL27a Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 OrthoFinder
Cz04g17060.t1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.11 OrthoFinder
Dusal.0238s00023.1 33193670 Ribosomal protein L18e/L15P [Interproscan]. 0.06 OrthoFinder
EOD32643 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.14 OrthoFinder
OT_15G01270.1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.18 OrthoFinder
PTI_01G10340.1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.16 OrthoFinder
Sro245_g097470.1 Contig3087.g24618 60S ribosomal protein L27a 0.21 OrthoFinder
SymbC1.scaffold356.19 356.19 Ribosomal protein L18e/L15P [Interproscan]. 0.02 OrthoFinder
TP02G09610.1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.12 OrthoFinder
Transcript_contig_69769 69769 Hypothetical protein 0.05 OrthoFinder
Vocar.0009s0068.1 32893144 Ribosomal protein L18e/L15P [Interproscan]. 0.09 OrthoFinder
XM_002501489.1 MICPUN_94088, 94088 Ribosomal protein L18e/L15P [Interproscan]. 0.19 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12979.1_7456 HaLaN_08771, GFH12979 60S ribosomal protein L27a 0.06 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60230.1_4356 PRW60230 60S ribosomal L27a-3 0.09 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495246.1_1244 KAA8495246 60S ribosomal protein L27a 0.09 OrthoFinder
lcl|VRMN01000027.1_cds_KAA8490430.1_2861 KAA8490430 60S ribosomal protein L27a 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 28 144
No external refs found!