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  5. XM_003057895.1

XM_003057895.1 (MicpuC2_70828, 70828)


Aliases : MicpuC2_70828, 70828

Description : Nitrite reductase fusion with b5r chloroplast precursor (NII)


Gene families : OG_01_0002779 (OrthoFinder) Phylogenetic Tree(s): OG0002779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003057895.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020941.42 tig00020941_g16234.t1 Ferredoxin--nitrite reductase, chloroplastic... 0.02 OrthoFinder
Cpa|evm.model.tig00020941.43 tig00020941_g16234.t1 Ferredoxin--nitrite reductase, chloroplastic... 0.02 OrthoFinder
Cre09.g410750 30780283, NII1 Nutrient uptake.nitrogen assimilation.nitrate... 0.04 OrthoFinder
Cz12g08110.t1 No alias Nitrite/sulphite reductase 4Fe-4S domain;... 0.04 OrthoFinder
Dusal.0498s00010.1 33193561 Nitrite/Sulfite reductase ferredoxin-like domain;... 0.11 OrthoFinder
Dusal.0498s00011.1 33193568 Nitrite/sulphite reductase 4Fe-4S domain [Interproscan]. 0.05 OrthoFinder
OT_10G00910.1 No alias Nitrite/Sulfite reductase ferredoxin-like domain;... 0.19 OrthoFinder
PTI_09G03500.1 No alias Nitrite/sulphite reductase 4Fe-4S domain;... 0.04 OrthoFinder
Sro70_g038780.1 Contig3352.g26225 Ferredoxin--nitrite reductase, chloroplastic (Fragment) 0.09 OrthoFinder
Transcript_contig_79358 79358 Nitrite/Sulfite reductase ferredoxin-like domain;... 0.06 OrthoFinder
XM_002507465.1 MICPUN_113259, 113259 Nadh-nitrite reductase (Nii) 0.12 OrthoFinder
lcl|BLLF01001585.1_cds_GFH20159.1_14636 HaLaN_17238, GFH20159 Ferredoxin-nitrite reductase 0.04 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21087.1_4867 PRW21087 Ferredoxin-nitrite reductase 0.08 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493547.1_4309 KAA8493547 Ferredoxin--nitrite reductase, chloroplastic 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010167 response to nitrate IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015706 nitrate transport IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:1901698 response to nitrogen compound IEP Enrichment
BP GO:1901700 response to oxygen-containing compound IEP Enrichment
InterPro domains Description Start Stop
IPR005117 NiRdtase/SiRdtase_haem-b_fer 446 509
IPR005117 NiRdtase/SiRdtase_haem-b_fer 184 250
IPR008333 Cbr1-like_FAD-bd_dom 751 850
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 263 418
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 525 636
IPR001433 OxRdtase_FAD/NAD-bd 877 986
No external refs found!