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  5. XM_003057335.1

XM_003057335.1 (MicpuC2_70921, 70921)


Aliases : MicpuC2_70921, 70921

Description : Zinc finger/ABC transporter fusion protein


Gene families : OG_01_0000132 (OrthoFinder) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003057335.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.51 tig00000383_g24665.t1 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00020629.98 tig00020629_g12419.t1 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cre01.g023787 30789637 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre11.g478128 30775784 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.06 OrthoFinder
Cz03g13130.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.05 OrthoFinder
Cz05g08050.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
Cz07g32170.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
Dusal.0100s00016.1 33202465 ABC transporter-like [Interproscan]. 0.04 OrthoFinder
Dusal.1033s00003.1 33195065 ABC transporter-like; ABC-transporter extension domain... 0.02 OrthoFinder
EOD04357 No alias ABC transporter protein [Ensembl]. 0.06 OrthoFinder
EOD07705 No alias ABC transporter protein [Ensembl]. 0.02 OrthoFinder
EOD21710 No alias W2 domain; ABC transporter-like; ABC-transporter... 0.02 OrthoFinder
OT_07G01740.1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
OT_15G01840.1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
OT_15G02610.1 No alias ABC-transporter extension domain; ABC transporter-like... 0.07 OrthoFinder
Sro1254_g256400.2 No alias ABC transporter-like [Interproscan]. 0.04 OrthoFinder
Sro2585_g331900.1 Contig1533.g13925 Tylosin resistance ATP-binding protein TlrC 0.01 OrthoFinder
SymbC1.scaffold3664.6 3664.6 ABC transporter-like; Serine aminopeptidase, S33;... 0.01 OrthoFinder
Transcript_contig_54041 54041 ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Transcript_contig_78244 78244 ABC-transporter extension domain; ABC transporter-like... 0.03 OrthoFinder
Vocar.0001s0777.1 32886021 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Vocar.0007s0396.1 32888020 ABC-transporter extension domain; ABC transporter-like... 0.03 OrthoFinder
Vocar.0027s0024.1 32887256 ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
XM_002502487.1 MICPUN_58625, 58625 ABC-transporter extension domain; ZC3H15/TMA46 family,... 0.05 OrthoFinder
XM_002503388.1 MICPUN_83355, 83355 ATP-binding cassette superfamily 0.07 OrthoFinder
XM_002505228.1 MICPUN_62615, 62615 ABC transporter 0.04 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61109.1_452 PRW61109 ATP-binding cassette 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56521.1_9655 PRW56521 ABC transporter F family member 4 isoform B 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498643.1_7596 KAA8498643 ABC transporter F family member 4 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR032378 ZC3H15/TMA46_C 261 326
IPR003439 ABC_transporter-like_ATP-bd 938 1073
IPR003439 ABC_transporter-like_ATP-bd 624 781
IPR032781 ABC_tran_Xtn 822 906
No external refs found!