XM_003056890.1 (MicpuC2_56546, 56546)


Aliases : MicpuC2_56546, 56546

Description : PLAT/LH2 domain; HELP [Interproscan].


Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003056890.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.33 tig00000042_g15425.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000042.34 tig00000042_g15425.t1 Calpain-type cysteine protease DEK1 OS=Zea mays 0.02 OrthoFinder
Cpa|evm.model.tig00000204.62 tig00000204_g17729.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000367.43 tig00000367_g24481.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00001093.16 tig00001093_g6893.t1 No description available 0.01 OrthoFinder
Cre06.g303400 30779939, FAP16 No description available 0.02 OrthoFinder
Cre10.g436000 30790221 No description available 0.04 OrthoFinder
EOD39577 No alias HELP [Interproscan]. 0.02 OrthoFinder
Vocar.0043s0042.1 32886885 WD40 repeat; HELP [Interproscan]. 0.02 OrthoFinder
XM_002499921.1 MICPUN_99060, 99060 HELP; WD40 repeat [Interproscan]. 0.06 OrthoFinder
XM_002501037.1 MICPUN_93773, 93773 HELP; WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002501695.1 MICPUN_100032, 100032 HELP; WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_002502455.1 MICPUN_58565, 58565 HELP; PLAT/LH2 domain; WD40 repeat [Interproscan]. 0.04 OrthoFinder
XM_002504527.1 MICPUN_61281, 61281 HELP; WD40 repeat [Interproscan]. 0.04 OrthoFinder
XM_002505709.1 MICPUN_63623, 63623 HELP; WD40 repeat; Anaphase-promoting complex subunit 4,... 0.03 OrthoFinder
XM_002505973.1 MICPUN_64185, 64185 Anaphase-promoting complex subunit 4, WD40 domain [Interproscan]. 0.05 OrthoFinder
XM_003061774.1 MicpuC2_20524, 20524 Hypothetical protein 0.03 OrthoFinder
XM_003061776.1 MicpuC2_48318, 48318 HELP [Interproscan]. 0.03 OrthoFinder
XM_003062633.1 MicpuC2_4590, 4590 WD40 repeat [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0045765 regulation of angiogenesis IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
BP GO:0051239 regulation of multicellular organismal process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901342 regulation of vasculature development IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:2000026 regulation of multicellular organismal development IEP Enrichment
InterPro domains Description Start Stop
IPR005108 HELP 241 306
IPR001024 PLAT/LH2_dom 1730 1843
IPR001024 PLAT/LH2_dom 2388 2495
IPR001024 PLAT/LH2_dom 1991 2101
IPR001024 PLAT/LH2_dom 2120 2231
IPR001024 PLAT/LH2_dom 1208 1313
IPR001024 PLAT/LH2_dom 1469 1583
IPR001024 PLAT/LH2_dom 1602 1706
IPR001024 PLAT/LH2_dom 1070 1179
IPR001024 PLAT/LH2_dom 1339 1449
IPR001024 PLAT/LH2_dom 1859 1967
IPR001024 PLAT/LH2_dom 2245 2349
No external refs found!