XM_003056868.1 (MicpuC2_62462, 62462)

Aliases : MicpuC2_62462, 62462

Description : Ribosomal protein L13e [Interproscan].

Gene families : OG_01_0002835 (OrthoFinder) Phylogenetic Tree(s): OG0002835_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_003056868.1
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020629.36	tig00020629_g12358.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	OrthoFinder
Cz15g22130.t1	No alias	Ribosomal protein L13e; Tetratricopeptide repeat [Interproscan].	0.09	OrthoFinder
Dusal.0041s00032.1	33194551	Ribosomal protein L13e [Interproscan].	0.04	OrthoFinder
EOD29349	No alias	60S ribosomal protein L13 [Ensembl].	0.06	OrthoFinder
OT_05G05020.1	No alias	Ribosomal protein L13e [Interproscan].	0.08	OrthoFinder
PTI_20G02450.1	No alias	Ribosomal protein L13e [Interproscan].	0.1	OrthoFinder
Sro307_g113390.1	Contig2839.g22809	60S ribosomal protein L13-1	0.12	OrthoFinder
TP04G08470.1	No alias	Ribosomal protein L13e [Interproscan].	0.1	OrthoFinder
Vocar.0006s0140.1	32894315	Ribosomal protein L13e [Interproscan].	0.03	OrthoFinder
XM_002502479.1	MICPUN_90780, 90780	Ribosomal protein L13e [Interproscan].	0.09	OrthoFinder
lcl\|BLLF01001412.1_cds_GFH19137.1_13614	HaLaN_16038, GFH19137	60S ribosomal protein L13	0.04	OrthoFinder
lcl\|BLLF01008736.1_cds_GFH33502.1_27979	HaLaN_32883, GFH33502	60S ribosomal protein L13	0.03	OrthoFinder
lcl\|LHPG02000001.1_cds_PRW61522.1_672	PRW61522	60S ribosomal L13-2	0.03	OrthoFinder
lcl\|VRMN01000011.1_cds_KAA8491921.1_4929	KAA8491921	60S ribosomal protein L13-1	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	Enrichment
CC	GO:0000151	ubiquitin ligase complex	IEP	Enrichment
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	Enrichment
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003951	NAD+ kinase activity	IEP	Enrichment
MF	GO:0005261	cation channel activity	IEP	Enrichment
CC	GO:0005680	anaphase-promoting complex	IEP	Enrichment
CC	GO:0005743	mitochondrial inner membrane	IEP	Enrichment
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	Enrichment
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Enrichment
CC	GO:0005777	peroxisome	IEP	Enrichment
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Enrichment
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Enrichment
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Enrichment
BP	GO:0006325	chromatin organization	IEP	Enrichment
BP	GO:0006476	protein deacetylation	IEP	Enrichment
BP	GO:0006739	NADP metabolic process	IEP	Enrichment
BP	GO:0006741	NADP biosynthetic process	IEP	Enrichment
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
MF	GO:0008121	ubiquinol-cytochrome-c reductase activity	IEP	Enrichment
BP	GO:0009060	aerobic respiration	IEP	Enrichment
BP	GO:0009165	nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0010921	regulation of phosphatase activity	IEP	Enrichment
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	Enrichment
MF	GO:0015252	proton channel activity	IEP	Enrichment
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Enrichment
BP	GO:0016569	covalent chromatin modification	IEP	Enrichment
BP	GO:0016570	histone modification	IEP	Enrichment
BP	GO:0016573	histone acetylation	IEP	Enrichment
BP	GO:0016575	histone deacetylation	IEP	Enrichment
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Enrichment
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Enrichment
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Enrichment
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Enrichment
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0019646	aerobic electron transport chain	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
CC	GO:0019866	organelle inner membrane	IEP	Enrichment
MF	GO:0019902	phosphatase binding	IEP	Enrichment
MF	GO:0019903	protein phosphatase binding	IEP	Enrichment
BP	GO:0022900	electron transport chain	IEP	Enrichment
BP	GO:0022904	respiratory electron transport chain	IEP	Enrichment
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	Enrichment
MF	GO:0030234	enzyme regulator activity	IEP	Enrichment
CC	GO:0030964	NADH dehydrogenase complex	IEP	Enrichment
CC	GO:0031248	protein acetyltransferase complex	IEP	Enrichment
BP	GO:0031399	regulation of protein modification process	IEP	Enrichment
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Enrichment
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Enrichment
BP	GO:0033043	regulation of organelle organization	IEP	Enrichment
BP	GO:0033044	regulation of chromosome organization	IEP	Enrichment
BP	GO:0033045	regulation of sister chromatid segregation	IEP	Enrichment
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0035303	regulation of dephosphorylation	IEP	Enrichment
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Enrichment
BP	GO:0035601	protein deacylation	IEP	Enrichment
CC	GO:0042579	microbody	IEP	Enrichment
MF	GO:0042802	identical protein binding	IEP	Enrichment
MF	GO:0042803	protein homodimerization activity	IEP	Enrichment
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Enrichment
CC	GO:0045271	respiratory chain complex I	IEP	Enrichment
CC	GO:0045275	respiratory chain complex III	IEP	Enrichment
BP	GO:0045333	cellular respiration	IEP	Enrichment
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Enrichment
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Enrichment
BP	GO:0050790	regulation of catalytic activity	IEP	Enrichment
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Enrichment
BP	GO:0051336	regulation of hydrolase activity	IEP	Enrichment
BP	GO:0051983	regulation of chromosome segregation	IEP	Enrichment
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Enrichment
BP	GO:0065009	regulation of molecular function	IEP	Enrichment
CC	GO:0070069	cytochrome complex	IEP	Enrichment
BP	GO:0098732	macromolecule deacylation	IEP	Enrichment
MF	GO:0098772	molecular function regulator	IEP	Enrichment
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Enrichment
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Enrichment
CC	GO:0098803	respiratory chain complex	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment
CC	GO:0140535	intracellular protein-containing complex	IEP	Enrichment
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Enrichment
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Enrichment
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Enrichment
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	Enrichment
CC	GO:1902493	acetyltransferase complex	IEP	Enrichment
CC	GO:1902494	catalytic complex	IEP	Enrichment
BP	GO:1905818	regulation of chromosome separation	IEP	Enrichment
CC	GO:1990204	oxidoreductase complex	IEP	Enrichment
CC	GO:1990234	transferase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001380	Ribosomal_L13e	7	190

External Links

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XM_003056868.1 (MicpuC2_62462, 62462)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation