1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003056504.1

XM_003056504.1 (MicpuC2_31842, 31842)


Aliases : MicpuC2_31842, 31842

Description : Porphobilinogen deaminase, chloroplast precursor (HEMC)


Gene families : OG_01_0001267 (OrthoFinder) Phylogenetic Tree(s): OG0001267_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003056504.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Cre16.g663900 30777054 Coenzyme metabolism.tetrapyrrol... 0.02 OrthoFinder
Cz03g22200.t1 No alias Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.03 OrthoFinder
Dusal.0145s00001.1 33195901 Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.02 OrthoFinder
EOD30502 No alias Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.02 OrthoFinder
OT_05G01260.1 No alias Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.03 OrthoFinder
PTI_06G02850.1 No alias Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.02 OrthoFinder
SymbC1.scaffold1450.3 1450.3 Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.03 OrthoFinder
SymbC1.scaffold25.247 25.247 HemY, N-terminal; Porphobilinogen deaminase, N-terminal;... 0.02 OrthoFinder
Transcript_contig_56407 56407 Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.04 OrthoFinder
XM_002507518.1 MICPUN_78011, 78011 Hydroxymethylbilane synthase (HMBS) 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEA Interproscan
BP GO:0033014 tetrapyrrole biosynthetic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006848 pyruvate transport IEP Enrichment
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:1901475 pyruvate transmembrane transport IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR022417 Porphobilin_deaminase_N 63 272
IPR022418 Porphobilinogen_deaminase_C 288 358
No external refs found!