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  5. XM_003055794.1

XM_003055794.1 (MicpuC2_55006, 55006)


Aliases : MicpuC2_55006, 55006

Description : ATP-binding cassette superfamily


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003055794.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.2 tig00000718_g3679.t1 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00000718.3 tig00000718_g3679.t1 ABC transporter C family member 6 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00001729.6 tig00001729_g9740.t1 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cre03.g174050 30787660, MRP4 Solute transport.primary active transport.ABC... 0.03 OrthoFinder
Cre13.g564900 30784450, MRP3 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cz01g21260.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Cz05g17060.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
Dusal.0852s00004.1 33185428 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
EOD08599 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
EOD26066 No alias EF-hand domain; ABC transporter type 1, transmembrane... 0.02 OrthoFinder
EOD34349 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
EOD37777 No alias Multidrug resistance-associated protein, ABC superfamily... 0.02 OrthoFinder
PTI_10G02780.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro1322_g262550.1 Contig3764.g28905 Multiple drug resistance-associated protein-like transporter 1 0.01 OrthoFinder
SymbC1.scaffold3934.5 3934.5 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
Vocar.0012s0088.1 32894879 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
lcl|BLLF01003175.1_cds_GFH26596.1_21073 HaLaN_24770, GFH26596 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 77 324
No external refs found!