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  5. XM_003055638.1

XM_003055638.1 (MicpuC2_24425, 24425)


Aliases : MicpuC2_24425, 24425

Description : RNA polymerase I specific transcription initiation factor RRN3 [Interproscan].


Gene families : OG_01_0003331 (OrthoFinder) Phylogenetic Tree(s): OG0003331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003055638.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Dusal.0871s00003.1 33191250 RNA polymerase I specific transcription initiation... 0.04 OrthoFinder
OT_10G02810.1 No alias RNA polymerase I specific transcription initiation... 0.06 OrthoFinder
Sro925_g220850.1 Contig3078.g24544 Specific transcription initiation factor RRN3 0.02 OrthoFinder
TP16G01010.1 No alias RNA polymerase I specific transcription initiation... 0.03 OrthoFinder
Transcript_contig_89879 89879 RNA polymerase I specific transcription initiation... 0.01 OrthoFinder
XM_002503399.1 MICPUN_101294, 101294 RNA polymerase I specific transcription initiation... 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34096.1_3110 PRW34096 RNA polymerase I-specific transcription initiation... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR007991 RNA_pol_I_trans_ini_fac_RRN3 11 300
No external refs found!