1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003055465.1

XM_003055465.1 (MicpuC2_30848, 30848)


Aliases : MicpuC2_30848, 30848

Description : Ribosomal protein L26/L24, eukaryotic/archaeal; KOW [Interproscan].


Gene families : OG_01_0003267 (OrthoFinder) Phylogenetic Tree(s): OG0003267_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003055465.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.60 tig00000144_g9051.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder
Cre01.g040000 30788495, RPL26 Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 OrthoFinder
Cz06g24050.t1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal [Interproscan]. 0.19 OrthoFinder
Dusal.0160s00007.1 33188333 Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.12 OrthoFinder
EOD37550 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.11 OrthoFinder
OT_12G00940.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.12 OrthoFinder
PTI_04G00150.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.18 OrthoFinder
Sro694_g188520.1 Contig4437.g33305 60S ribosomal protein L26 0.24 OrthoFinder
SymbC1.scaffold27.16 27.16 KOW; Ribosomal protein L26/L24, eukaryotic/archaeal... 0.02 OrthoFinder
TP05G04810.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.19 OrthoFinder
Vocar.0001s0799.1 32884988 KOW; Ribosomal protein L26/L24, eukaryotic/archaeal... 0.09 OrthoFinder
XM_002503926.1 MICPUN_91267, 91267 KOW; Ribosomal protein L26/L24, eukaryotic/archaeal... 0.17 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60014.1_6792 PRW60014 60S ribosomal L26-1 0.09 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496763.1_492 KAA8496763 60S ribosomal protein L26 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
IPR005824 KOW 51 82
No external refs found!