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Aliases : MicpuC2_30690, 30690
Description : Small GTPase superfamily, ARF/SAR type [Interproscan].
Gene families : OG_01_0000272 (OrthoFinder) Phylogenetic Tree(s): OG0000272_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003055367.1 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021127.129 | tig00021127_g18809.t2 | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.02 | OrthoFinder | |
| Cre02.g102000 | 30785410, ARL5 | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.03 | OrthoFinder | |
| Cre12.g535900 | 30792839, ARL1 | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.02 | OrthoFinder | |
| Cz02g22080.t1 | No alias | Small GTPase superfamily, ARF/SAR type [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0091s00001.1 | 33193964 | Small GTPase superfamily, ARF/SAR type [Interproscan]. | 0.01 | OrthoFinder | |
| EOD07355 | No alias | ADP-ribosylation factor [Ensembl]. | 0.01 | OrthoFinder | |
| EOD20037 | No alias | ARL1, ARF-like GTPase [Ensembl]. | 0.03 | OrthoFinder | |
| PTI_01G11490.1 | No alias | Small GTPase superfamily, ARF/SAR type [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_57121 | 57121 | Small GTPase superfamily, ARF/SAR type [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0043s0071.1 | 32886888 | Small GTPase superfamily, ARF/SAR type [Interproscan]. | 0.03 | OrthoFinder | |
| lcl|VRMN01000003.1_cds_KAA8495757.1_1755 | KAA8495757 | ADP-ribosylation factor 1 | 0.04 | OrthoFinder | |
| lcl|VRMN01000006.1_cds_KAA8493787.1_4549 | KAA8493787 | ADP-ribosylation factor 1 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005525 | GTP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Enrichment |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Enrichment |
| MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
| MF | GO:0003713 | transcription coactivator activity | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
| BP | GO:0006402 | mRNA catabolic process | IEP | Enrichment |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| BP | GO:0008202 | steroid metabolic process | IEP | Enrichment |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Enrichment |
| BP | GO:0010033 | response to organic substance | IEP | Enrichment |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Enrichment |
| BP | GO:0016125 | sterol metabolic process | IEP | Enrichment |
| BP | GO:0016126 | sterol biosynthetic process | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| BP | GO:0019236 | response to pheromone | IEP | Enrichment |
| CC | GO:0030008 | TRAPP complex | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0042221 | response to chemical | IEP | Enrichment |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | Enrichment |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Enrichment |
| BP | GO:0044093 | positive regulation of molecular function | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0065009 | regulation of molecular function | IEP | Enrichment |
| BP | GO:0110154 | RNA decapping | IEP | Enrichment |
| BP | GO:0110156 | methylguanosine-cap decapping | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006689 | Small_GTPase_ARF/SAR | 5 | 177 |
| No external refs found! |