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Aliases : MicpuC2_13068, 13068
Description : Carotenoid oxygenase [Interproscan].
Gene families : OG_01_0000773 (OrthoFinder) Phylogenetic Tree(s): OG0000773_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003055246.1 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre16.g657800 | 30777499, CCD3 | Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum sativum | 0.02 | OrthoFinder | |
| Cz09g31270.t1 | No alias | Carotenoid oxygenase [Interproscan]. | 0.02 | OrthoFinder | |
| OT_03G03940.1 | No alias | Carotenoid oxygenase [Interproscan]. | 0.04 | OrthoFinder | |
| XM_002499814.1 | MICPUN_56538, 56538 | Carotenoid oxygenase [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01001104.1_cds_GFH17146.1_11623 | HaLaN_13711, GFH17146 | Carotenoid oxygenase | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEA | Interproscan |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004448 | isocitrate dehydrogenase activity | IEP | Enrichment |
| MF | GO:0004450 | isocitrate dehydrogenase (NADP+) activity | IEP | Enrichment |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Enrichment |
| BP | GO:0006812 | cation transport | IEP | Enrichment |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
| BP | GO:0009966 | regulation of signal transduction | IEP | Enrichment |
| BP | GO:0010646 | regulation of cell communication | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| BP | GO:0023051 | regulation of signaling | IEP | Enrichment |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Enrichment |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Enrichment |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Enrichment |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Enrichment |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Enrichment |
| BP | GO:0051259 | protein complex oligomerization | IEP | Enrichment |
| BP | GO:0051260 | protein homooligomerization | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004294 | Carotenoid_Oase | 115 | 599 |
| No external refs found! |