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Aliases : MicpuC2_12811, 12811
Description : Peptidase S54, rhomboid domain [Interproscan].
Gene families : OG_01_0000723 (OrthoFinder) Phylogenetic Tree(s): OG0000723_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003054966.1 | |
| Cluster | HCCA: Cluster_33 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| lcl|VRMN01000001.1_cds_KAA8498757.1_7710 | KAA8498757 | Rhomboid-like protein 15 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004252 | serine-type endopeptidase activity | IEA | Interproscan |
| CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Enrichment |
| MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | Enrichment |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Enrichment |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015693 | magnesium ion transport | IEP | Enrichment |
| CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Enrichment |
| CC | GO:0017119 | Golgi transport complex | IEP | Enrichment |
| MF | GO:0033218 | amide binding | IEP | Enrichment |
| BP | GO:0043461 | proton-transporting ATP synthase complex assembly | IEP | Enrichment |
| CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Enrichment |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Enrichment |
| BP | GO:0070071 | proton-transporting two-sector ATPase complex assembly | IEP | Enrichment |
| MF | GO:0070403 | NAD+ binding | IEP | Enrichment |
| CC | GO:0099023 | vesicle tethering complex | IEP | Enrichment |
| MF | GO:0120227 | acyl-CoA binding | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| MF | GO:1901567 | fatty acid derivative binding | IEP | Enrichment |
| MF | GO:1901681 | sulfur compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022764 | Peptidase_S54_rhomboid_dom | 53 | 200 |
| No external refs found! |