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  5. XM_003054821.1

XM_003054821.1 (MicpuC2_30685, 30685)


Aliases : MicpuC2_30685, 30685

Description : Ribosomal protein S19/S15 [Interproscan].


Gene families : OG_01_0001210 (OrthoFinder) Phylogenetic Tree(s): OG0001210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003054821.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020830.61 tig00020830_g14444.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder
Cre08.g360900 30773772, RPS15 Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 OrthoFinder
Cz15g01190.t1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.06 OrthoFinder
Dusal.0059s00011.1 33203224 Ribosomal protein S19/S15 [Interproscan]. 0.07 OrthoFinder
EOD22236 No alias Ribosomal protein S19/S15 [Interproscan]. 0.07 OrthoFinder
OT_12G02670.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.09 OrthoFinder
PTI_06G03210.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.15 OrthoFinder
Sro1505_g278180.1 Contig474.g6440 40S ribosomal protein S15 0.13 OrthoFinder
Sro51_chlor_g029510.1 Rps19 Rps19 0.02 OrthoFinder
Sro884_mit_g215570.1 Rps19 Rps19 0.01 OrthoFinder
SymbC1.scaffold5416.2 5416.2 Major facilitator, sugar transporter-like; Ribosomal... 0.03 OrthoFinder
TP03G03270.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.11 OrthoFinder
Vocar.0021s0199.1 32896013 Ribosomal protein S19/S15 [Interproscan]. 0.03 OrthoFinder
XM_002507550.1 MICPUN_89585, 89585 Ribosomal protein S19/S15 [Interproscan]. 0.06 OrthoFinder
lcl|BLLF01002576.1_cds_GFH24586.1_19063 HaLaN_22406, GFH24586 S15 ribosomal protein 0.03 OrthoFinder
lcl|BLLF01005146.1_cds_GFH30784.1_25261 HaLaN_29704, GFH30784 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33918.1_2873 PRW33918 40S ribosomal S15 0.06 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500014.1_8967 KAA8500014 40S ribosomal protein S15 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 49 134
No external refs found!