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  5. XM_002509359.1

XM_002509359.1 (MICPUN_62857, 62857)


Aliases : MICPUN_62857, 62857

Description : Splicing factor 1, helix-hairpin domain; K Homology domain, type 1; RNA recognition motif domain [Interproscan].


Gene families : OG_01_0001291 (OrthoFinder) Phylogenetic Tree(s): OG0001291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002509359.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001154.10 tig00001154_g7273.t1 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
Cre09.g386731 30780511 RNA processing.RNA splicing.U2-type-intron-specific... 0.04 OrthoFinder
Cz07g11130.t1 No alias K Homology domain, type 1; Splicing factor 1,... 0.02 OrthoFinder
XM_003058684.1 MicpuC2_57807, 57807 K Homology domain, type 1; Splicing factor 1,... 0.03 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20729.1_5273 PRW20729 Branchpoint-bridging-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
BP GO:0008156 negative regulation of DNA replication IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0048478 replication fork protection IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 528 597
IPR032570 SF1-HH 221 303
IPR004088 KH_dom_type_1 322 392
No external refs found!