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  5. XM_002508739.1

XM_002508739.1 (MICPUN_61974, 61974)


Aliases : MICPUN_61974, 61974

Description : Cryptochrome/DNA photolyase, FAD-binding domain; DNA photolyase, N-terminal [Interproscan].


Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508739.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000391.2 tig00000391_g24833.t1 DNA damage response.DNA repair... 0.03 OrthoFinder
Cpa|evm.model.tig00020965.69 tig00020965_g16882.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.03 OrthoFinder
Cpa|evm.model.tig00020965.70 tig00020965_g16882.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.03 OrthoFinder
Cpa|evm.model.tig00021012.26 tig00021012_g17007.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.04 OrthoFinder
Cpa|evm.model.tig00021579.19 tig00021579_g22443.t1 Cryptochrome-1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre02.g078939 30785814 Cryptochrome DASH, chloroplastic/mitochondrial... 0.03 OrthoFinder
Dusal.0183s00016.1 33202617 Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.02 OrthoFinder
Dusal.0345s00010.1 33198539 DNA photolyase, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD11134 No alias Putative Cry-DASH cryptochrome [Ensembl]. 0.03 OrthoFinder
EOD19626 No alias Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.02 OrthoFinder
EOD24687 No alias Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. 0.04 OrthoFinder
PTI_08G03200.1 No alias Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.03 OrthoFinder
Sro2726_g335660.1 Contig3579.g27670 Cryptochrome DASH 0.05 OrthoFinder
Sro580_g170080.1 Contig2039.g17523 Deoxyribodipyrimidine photo-lyase 0.05 OrthoFinder
Transcript_contig_56266 56266 DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.02 OrthoFinder
Vocar.0001s0913.1 32884261 DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.02 OrthoFinder
lcl|BLLF01000049.1_cds_GFH06657.1_1134 HaLaN_01325, GFH06657 Photolyase/cryptochrome alpha/beta domain-containing protein 0.03 OrthoFinder
lcl|BLLF01001067.1_cds_GFH16890.1_11367 HaLaN_13407, GFH16890 Deoxyribodipyrimidine photo-lyase 0.01 OrthoFinder
lcl|BLLF01001533.1_cds_GFH19868.1_14345 HaLaN_16893, GFH19868 Photolyase/cryptochrome alpha/beta domain-containing protein 0.03 OrthoFinder
lcl|BLLF01001533.1_cds_GFH19869.1_14346 HaLaN_16894, GFH19869 Photolyase/cryptochrome alpha/beta domain-containing protein 0.04 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39254.1_2665 PRW39254 Cryptochrome DASH 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0007275 multicellular organism development IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0032501 multicellular organismal process IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048856 anatomical structure development IEP Enrichment
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 342 538
IPR006050 DNA_photolyase_N 7 159
No external refs found!