XM_002508197.1 (MICPUN_60767, 60767)


Aliases : MICPUN_60767, 60767

Description : Small-subunit processome, Utp12 [Interproscan].


Gene families : OG_01_0004178 (OrthoFinder) Phylogenetic Tree(s): OG0004178_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508197.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000123.23 tig00000123_g6930.t1 No description available 0.1 OrthoFinder
Cre12.g538500 30792430 No description available 0.1 OrthoFinder
Dusal.0093s00009.1 33185317 Small-subunit processome, Utp12 [Interproscan]. 0.02 OrthoFinder
EOD28390 No alias WD40 repeat [Interproscan]. 0.04 OrthoFinder
OT_08G03100.1 No alias Small-subunit processome, Utp12 [Interproscan]. 0.07 OrthoFinder
PTI_14G00080.1 No alias Small-subunit processome, Utp12 [Interproscan]. 0.08 OrthoFinder
Sro2322_g323270.1 Contig3734.g28639 WD repeat domain 43 0.06 OrthoFinder
TP09G00160.1 No alias Hypothetical protein 0.06 OrthoFinder
Vocar.0034s0018.1 32893029 Small-subunit processome, Utp12 [Interproscan]. 0.03 OrthoFinder
XM_003058886.1 MicpuC2_58229, 58229 Small-subunit processome, Utp12 [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492841.1_2577 KAA8492841 WD repeat-containing protein 43 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0031418 L-ascorbic acid binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007148 SSU_processome_Utp12 165 267
No external refs found!