XM_002508173.1 (MICPUN_94915, 94915)

Aliases : MICPUN_94915, 94915

Description : ATP-binding cassette superfamily

Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_002508173.1
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000718.1	tig00000718_g3679.t1	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.03	OrthoFinder
Cpa\|evm.model.tig00000718.2	tig00000718_g3679.t1	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.04	OrthoFinder
Cpa\|evm.model.tig00000718.3	tig00000718_g3679.t1	ABC transporter C family member 6 OS=Arabidopsis thaliana	0.04	OrthoFinder
Cpa\|evm.model.tig00000769.1	tig00000769_g3997.t1	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00001024.2	tig00001729_g9740.t1	ABC transporter C family member 14 OS=Arabidopsis thaliana	0.04	OrthoFinder
Cpa\|evm.model.tig00001729.6	tig00001729_g9740.t1	Solute transport.primary active transport.ABC...	0.04	OrthoFinder
Cpa\|evm.model.tig00020553.190	tig00020553_g10680.t1	ABC transporter C family member 4 OS=Arabidopsis thaliana	0.05	OrthoFinder
Cpa\|evm.model.tig00020553.191	tig00020553_g10681.t1	ABC transporter C family member 11 OS=Arabidopsis thaliana	0.05	OrthoFinder
Cpa\|evm.model.tig00020592.4	tig00020592_g11633.t1	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.04	OrthoFinder
Cre13.g564900	30784450, MRP3	Solute transport.primary active transport.ABC...	0.04	OrthoFinder
Cre17.g734612	30781956, MRP2	ABC transporter C family member 14 OS=Arabidopsis thaliana	0.05	OrthoFinder
Cz05g17060.t1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.07	OrthoFinder
Dusal.0432s00003.1	33197469	ABC transporter-like; ABC transporter type 1,...	0.03	OrthoFinder
Dusal.0852s00004.1	33185428	ABC transporter-like; ABC transporter type 1,...	0.04	OrthoFinder
EOD08599	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.05	OrthoFinder
EOD26066	No alias	EF-hand domain; ABC transporter type 1, transmembrane...	0.1	OrthoFinder
EOD33714	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.05	OrthoFinder
EOD34349	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
EOD37777	No alias	Multidrug resistance-associated protein, ABC superfamily...	0.06	OrthoFinder
OT_03G00040.1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.06	OrthoFinder
PTI_03G06590.1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.03	OrthoFinder
Sro1322_g262550.1	Contig3764.g28905	Multiple drug resistance-associated protein-like transporter 1	0.03	OrthoFinder
Sro183_g079600.1	Contig3056.g24305	Multiple drug resistance-associated protein-like transporter 1	0.04	OrthoFinder
Sro200_g084620.1	Contig201.g2353	Oligomycin resistance ATP-dependent permease YOR1	0.01	OrthoFinder
Sro399_g134960.1	Contig279.g3623	Multiple drug resistance-associated protein-like transporter 1	0.02	OrthoFinder
Sro61_g035030.1	Contig3112.g24756	Multiple drug resistance-associated protein-like transporter 1	0.01	OrthoFinder
TP07G05800.1	No alias	ABC transporter-like; ABC transporter type 1,...	0.03	OrthoFinder
Transcript_contig_56264	56264	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
Transcript_contig_56405	56405	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
Vocar.0012s0088.1	32894879	ABC transporter-like; ABC transporter type 1,...	0.02	OrthoFinder
lcl\|BLLF01000618.1_cds_GFH13488.1_7965	HaLaN_09381, GFH13488	ABC transporter	0.02	OrthoFinder
lcl\|BLLF01000878.1_cds_GFH15643.1_10120	HaLaN_11904, GFH15643	ATP-binding cassette transporter	0.01	OrthoFinder
lcl\|BLLF01003175.1_cds_GFH26596.1_21073	HaLaN_24770, GFH26596	ABC transporter type 1, transmembrane domain; ABC...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004402	histone acetyltransferase activity	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
BP	GO:0006473	protein acetylation	IEP	Enrichment
BP	GO:0006475	internal protein amino acid acetylation	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Enrichment
BP	GO:0016573	histone acetylation	IEP	Enrichment
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016830	carbon-carbon lyase activity	IEP	Enrichment
MF	GO:0016832	aldehyde-lyase activity	IEP	Enrichment
MF	GO:0016851	magnesium chelatase activity	IEP	Enrichment
BP	GO:0018205	peptidyl-lysine modification	IEP	Enrichment
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Enrichment
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Enrichment
MF	GO:0019899	enzyme binding	IEP	Enrichment
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Enrichment
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Enrichment
BP	GO:0043543	protein acylation	IEP	Enrichment
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	Enrichment
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	Enrichment
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	1068	1216
IPR003439	ABC_transporter-like_ATP-bd	442	576
IPR011527	ABC1_TM_dom	760	991
IPR011527	ABC1_TM_dom	105	380

External Links

No external refs found!

XM_002508173.1 (MICPUN_94915, 94915)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation