1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002507390.1

XM_002507390.1 (MICPUN_54846, 54846)


Aliases : MICPUN_54846, 54846

Description : U box domain [Interproscan].


Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002507390.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cre12.g507200 30791912 No description available 0.02 OrthoFinder
EOD03698 No alias U box domain [Interproscan]. 0.01 OrthoFinder
EOD40992 No alias U box domain [Interproscan]. 0.01 OrthoFinder
Sro162_g072800.1 Contig2670.g21616 STIP1 homology and U box-containing protein 1 0.01 OrthoFinder
Transcript_contig_54040 54040 U box domain; WD40 repeat [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0015939 pantothenate metabolic process IEP Enrichment
BP GO:0015940 pantothenate biosynthetic process IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003613 Ubox_domain 597 666
No external refs found!