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  5. XM_002507141.1

XM_002507141.1 (MICPUN_55174, 55174)


Aliases : MICPUN_55174, 55174

Description : DNA-directed RNA polymerase III subunit Rpc5 [Interproscan].


Gene families : OG_01_0003806 (OrthoFinder) Phylogenetic Tree(s): OG0003806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002507141.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_56648 56648 DNA-directed RNA polymerase III subunit Rpc5 [Interproscan]. 0.01 OrthoFinder
XM_003056051.1 MicpuC2_55547, 55547 DNA-directed RNA polymerase III subunit Rpc5 [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56647.1_9488 PRW56647 DNA-directed RNA polymerase III subunit RPC5 isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004594 pantothenate kinase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0015936 coenzyme A metabolic process IEP Enrichment
BP GO:0015937 coenzyme A biosynthetic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
MF GO:0019211 phosphatase activator activity IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR006886 RNA_pol_III_Rpc5 76 410
No external refs found!