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  5. XM_002506190.1

XM_002506190.1 (MICPUN_95921, 95921)


Aliases : MICPUN_95921, 95921

Description : 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type [Interproscan].


Gene families : OG_01_0001970 (OrthoFinder) Phylogenetic Tree(s): OG0001970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506190.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cre12.g490350 30792879, HDS1 Secondary metabolism.terpenoids.methylerythritol... 0.07 OrthoFinder
Dusal.0818s00002.1 33187127 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.02 OrthoFinder
EOD30795 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.05 OrthoFinder
OT_09G00940.1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.09 OrthoFinder
PTI_05G03380.1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.05 OrthoFinder
Sro162_g072810.1 Contig2670.g21617 Hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 0.08 OrthoFinder
TP08G03920.1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.06 OrthoFinder
Transcript_contig_54541 54541 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.02 OrthoFinder
Vocar.0031s0090.1 32890075 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.03 OrthoFinder
lcl|BLLF01001748.1_cds_GFH21030.1_15507 HaLaN_18253, GFH21030 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 0.04 OrthoFinder
lcl|BLLF01004560.1_cds_GFH29853.1_24330 HaLaN_28590, GFH29853 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44903.1_2058 PRW44903 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase... 0.07 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0051180 vitamin transport IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
MF GO:0090482 vitamin transmembrane transporter activity IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004588 IspG_bac-typ 43 316
IPR004588 IspG_bac-typ 514 680
No external refs found!