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  5. XM_002505777.1

XM_002505777.1 (MICPUN_109404, 109404)


Aliases : MICPUN_109404, 109404

Description : Ribosome hibernation promoting factor/RaiA; Sigma 54 modulation/S30EA ribosomal protein, C-terminal [Interproscan].


Gene families : OG_01_0002719 (OrthoFinder) Phylogenetic Tree(s): OG0002719_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002505777.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
OT_14G01350.1 No alias Ribosome hibernation promoting factor/RaiA [Interproscan]. 0.04 OrthoFinder
XM_003063820.1 MicpuC2_49753, 49753 Ribosome hibernation promoting factor/RaiA; Sigma 54... 0.03 OrthoFinder
lcl|BLLF01000499.1_cds_GFH12399.1_6876 HaLaN_08078, GFH12399 30S ribosomal protein 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0044238 primary metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
BP GO:0006885 regulation of pH IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008239 dipeptidyl-peptidase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055067 monovalent inorganic cation homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR032528 Ribosom_S30AE_C 220 274
IPR003489 RHF/RaiA 82 182
No external refs found!