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  5. XM_002505564.1

XM_002505564.1 (MICPUN_109418, 109418)


Aliases : MICPUN_109418, 109418

Description : PDZ domain; Trypsin-like peptidase domain [Interproscan].


Gene families : OG_01_0000099 (OrthoFinder) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002505564.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.23 tig00000383_g24634.t1 Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0010s00005.1 33196819 Trypsin-like peptidase domain [Interproscan]. 0.02 OrthoFinder
PTI_11G03430.1 No alias Trypsin-like peptidase domain; PDZ domain [Interproscan]. 0.01 OrthoFinder
Sro400_g134980.1 Contig1256.g11741 Probable periplasmic serine endoprotease DegP-like 0.01 OrthoFinder
SymbC1.scaffold2439.5 2439.5 PDZ domain; Alpha/beta hydrolase fold-3; Trypsin-like... 0.02 OrthoFinder
Transcript_contig_53695 53695 Trypsin-like peptidase domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55915 55915 PDZ domain; Trypsin-like peptidase domain [Interproscan]. 0.01 OrthoFinder
XM_003056803.1 MicpuC2_56320, 56320 Trypsin-like peptidase domain; PDZ domain [Interproscan]. 0.05 OrthoFinder
XM_003063678.1 MicpuC2_36720, 36720 Trypsin-like peptidase domain; PDZ domain [Interproscan]. 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497898.1_6851 KAA8497898 Protease Do-like 1, chloroplastic 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495633.1_1631 KAA8495633 Protease Do-like 1, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
InterPro domains Description Start Stop
IPR001478 PDZ 336 418
No external refs found!