XM_002505486.1 (MICPUN_87744, 87744)

Aliases : MICPUN_87744, 87744

Description : ATP-binding cassette superfamily

Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_002505486.1
Cluster	HCCA: Cluster_68

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00000654.30	tig00000654_g2824.t1	ABC transporter B family member 25 OS=Oryza sativa...	0.01	OrthoFinder
Sro157_g071300.1	Contig2362.g19420	Lactococcin transport/processing ATP-binding protein LcnC-like	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Enrichment
MF	GO:0003847	1-alkyl-2-acetylglycerophosphocholine esterase activity	IEP	Enrichment
BP	GO:0007034	vacuolar transport	IEP	Enrichment
CC	GO:0009522	photosystem I	IEP	Enrichment
BP	GO:0010024	phytochromobilin biosynthetic process	IEP	Enrichment
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Enrichment
BP	GO:0016042	lipid catabolic process	IEP	Enrichment
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Enrichment
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Enrichment
MF	GO:0016859	cis-trans isomerase activity	IEP	Enrichment
MF	GO:0050897	cobalt ion binding	IEP	Enrichment
BP	GO:0051202	phytochromobilin metabolic process	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	2	192
IPR003439	ABC_transporter-like_ATP-bd	262	411

External Links

No external refs found!

XM_002505486.1 (MICPUN_87744, 87744)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation