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  5. XM_002505408.1

XM_002505408.1 (MICPUN_95710, 95710)


Aliases : MICPUN_95710, 95710

Description : Snf7 family [Interproscan].


Gene families : OG_01_0000736 (OrthoFinder) Phylogenetic Tree(s): OG0000736_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002505408.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020510.41 tig00020510_g9823.t1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 OrthoFinder
Cpa|evm.model.tig00020830.6 tig00020830_g14387.t1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder
Cre04.g213450 30791227, VPS2A Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 OrthoFinder
Cre17.g735400 30782779, VPS2B Vesicle trafficking.endomembrane trafficking.ESCRT... 0.05 OrthoFinder
EOD26134 No alias Vacuolar protein sorting protein 2A [Ensembl]. 0.01 OrthoFinder
EOD31511 No alias Snf7 family [Interproscan]. 0.03 OrthoFinder
OT_12G01970.1 No alias Snf7 family [Interproscan]. 0.03 OrthoFinder
PTI_21G00840.1 No alias Snf7 family [Interproscan]. 0.03 OrthoFinder
Transcript_contig_67861 67861 Snf7 family [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002533.1_cds_GFH24426.1_18903 HaLaN_22221, GFH24426 Snf7 family [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57435.1_9075 PRW57435 Vacuolar sorting-associated 24-like protein 1-like 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498509.1_7462 KAA8498509 Charged multivesicular body protein 2b 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 19 183
No external refs found!