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  5. XM_002504874.1

XM_002504874.1 (MICPUN_62518, 62518)


Aliases : MICPUN_62518, 62518

Description : Radial spoke protein 16 (RSP16)


Gene families : OG_01_0009664 (OrthoFinder) Phylogenetic Tree(s): OG0009664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504874.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre12.g511050 30793058, RSP16 DnaJ protein ERDJ3B OS=Arabidopsis thaliana 0.14 OrthoFinder
Dusal.0467s00002.1 33194479 DnaJ domain; Chaperone DnaJ, C-terminal [Interproscan]. 0.03 OrthoFinder
Vocar.0016s0197.1 32897943 Chaperone DnaJ, C-terminal; DnaJ domain [Interproscan]. 0.03 OrthoFinder
XM_003060644.1 MicpuC2_19233, 19233 Flagellar radial spoke protein (RSP9) 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0030686 90S preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002939 DnaJ_C 133 289
IPR001623 DnaJ_domain 2 63
No external refs found!