1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002504323.1

XM_002504323.1 (MICPUN_113360, 113360)


Aliases : MICPUN_113360, 113360

Description : MIT; ATPase, AAA-type, core; Vps4 oligomerisation, C-terminal [Interproscan].


Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504323.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.123 tig00000093_g3553.t1 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder
Cpa|evm.model.tig00000093.212 tig00000093_g3637.t1 Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase... 0.02 OrthoFinder
Cpa|evm.model.tig00000989.10 tig00000989_g6084.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001126.11 tig00001126_g7122.t1 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1... 0.04 OrthoFinder
Cre02.g079300 30786252, VPS4 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.05 OrthoFinder
Cre12.g541300 30792645 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre16.g650151 30777740 Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase... 0.02 OrthoFinder
Cre17.g716450 30781986 Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase... 0.01 OrthoFinder
Cz04g31240.t1 No alias Vps4 oligomerisation, C-terminal; ATPase, AAA-type,... 0.02 OrthoFinder
EOD25988 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.02 OrthoFinder
OT_10G00610.1 No alias MIT; ATPase, AAA-type, core; Vps4 oligomerisation,... 0.03 OrthoFinder
PTI_27G00180.1 No alias AAA ATPase, AAA+ lid domain; MIT; ATPase, AAA-type,... 0.02 OrthoFinder
PTI_31G00050.1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.01 OrthoFinder
Sro1177_g249420.1 Contig1274.g11883 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 0.02 OrthoFinder
TP01G08640.1 No alias ATPase, AAA-type, core; Vps4 oligomerisation,... 0.01 OrthoFinder
Transcript_contig_54972 54972 MIT; ATPase, AAA-type, core; Vps4 oligomerisation,... 0.01 OrthoFinder
Transcript_contig_89153 89153 ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
Vocar.0004s0337.1 32889894 ATPase, AAA-type, core; Vps4 oligomerisation,... 0.02 OrthoFinder
XM_003057534.1 MicpuC2_16445, 16445 Microtubule-severing protein katanin 60kDa subunit (KAT1) 0.02 OrthoFinder
XM_003064781.1 MicpuC2_67802, 67802 MIT; ATPase, AAA-type, core; Vps4 oligomerisation,... 0.05 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44343.1_2378 PRW44343 Vacuolar sorting-associated 4-like 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497879.1_6832 KAA8497879 Vacuolar protein sorting-associated protein 4 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 175 305
IPR015415 Vps4_C 379 443
IPR007330 MIT_dom 12 76
No external refs found!