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  5. XM_002504161.1

XM_002504161.1 (MICPUN_76997, 76997)


Aliases : MICPUN_76997, 76997

Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504161.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.146 tig00020553_g10637.t1 Serine/arginine-rich splicing factor SR45a... 0.02 OrthoFinder
Cpa|evm.model.tig00021043.13 tig00021043_g17622.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021433.15 tig00021433_g21269.t1 No description available 0.02 OrthoFinder
Cre06.g288750 30780037, CBP20 No description available 0.02 OrthoFinder
Cre09.g392350 30780381 Glycine-rich RNA-binding protein 2, mitochondrial... 0.03 OrthoFinder
Cre17.g729150 30782801 No description available 0.02 OrthoFinder
Cz06g14010.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Sro12_g009400.1 Contig2293.g18960 Trans isomerase E 0.02 OrthoFinder
Sro1843_g301200.1 Contig4701.g34968 SC35-like splicing factor 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 2 40
No external refs found!