XM_002503657.1 (MICPUN_83775, 83775)


Aliases : MICPUN_83775, 83775

Description : DNA-directed RNA polymerase, phage-type; DNA-directed RNA polymerase, N-terminal [Interproscan].


Gene families : OG_01_0004012 (OrthoFinder) Phylogenetic Tree(s): OG0004012_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002503657.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cre02.g075600 30786216 RNA biosynthesis.organelle machineries.RNA polymerase... 0.05 OrthoFinder
Cz11g01070.t1 No alias DNA-directed RNA polymerase, N-terminal; DNA-directed... 0.02 OrthoFinder
OT_09G04050.1 No alias DNA-directed RNA polymerase, N-terminal; DNA-directed... 0.04 OrthoFinder
Vocar.0001s1539.1 32884920 DNA-directed RNA polymerase, N-terminal; DNA-directed... 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32901.1_3668 PRW32901 DNA-directed RNA polymerase chloroplastic mitochondrial 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002092 DNA-dir_Rpol_phage-type 504 899
IPR029262 RPOL_N 30 365
No external refs found!