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  5. XM_002503222.1

XM_002503222.1 (MICPUN_82791, 82791)


Aliases : MICPUN_82791, 82791

Description : BEACH domain; WD40 repeat; PH-BEACH domain [Interproscan].


Gene families : OG_01_0000641 (OrthoFinder) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002503222.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
EOD31744 No alias BEACH domain [Interproscan]. 0.04 OrthoFinder
OT_04G03470.1 No alias PH-BEACH domain; Domain of unknown function DUF4704;... 0.03 OrthoFinder
PTI_02G06570.1 No alias BEACH domain; PH-BEACH domain [Interproscan]. 0.02 OrthoFinder
PTI_04G02200.1 No alias BEACH domain; PH-BEACH domain [Interproscan]. 0.05 OrthoFinder
PTI_11G00330.1 No alias BEACH domain; PH-BEACH domain; WD40 repeat [Interproscan]. 0.03 OrthoFinder
PTI_25G00490.1 No alias BEACH domain; Domain of unknown function DUF4704;... 0.02 OrthoFinder
Sro1247_g255870.1 Contig2843.g22827 Lipopolysaccharide-responsive and beige-like anchor protein 0.02 OrthoFinder
Sro1730_g294110.1 Contig2449.g20048 Lipopolysaccharide-responsive and beige-like anchor protein 0.01 OrthoFinder
Sro436_g142590.1 Contig228.g2747 Lipopolysaccharide-responsive and beige-like anchor protein 0.03 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34046.1_2968 PRW34046 BEACH domain-containing lvsC isoform X1 isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000409 BEACH_dom 170 450
IPR001680 WD40_repeat 641 674
IPR023362 PH-BEACH_dom 47 146
No external refs found!