1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002502791.1

XM_002502791.1 (MICPUN_82380, 82380)


Aliases : MICPUN_82380, 82380

Description : Brf1, TBP-binding domain; Transcription factor TFIIB, cyclin-like domain [Interproscan].


Gene families : OG_01_0002221 (OrthoFinder) Phylogenetic Tree(s): OG0002221_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002502791.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cz11g09220.t1 No alias Transcription factor TFIIB, cyclin-like domain [Interproscan]. 0.02 OrthoFinder
OT_13G01670.1 No alias Transcription factor TFIIB, cyclin-like domain; Brf1,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0017025 TBP-class protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR013150 TFIIB_cyclin 45 118
IPR011665 BRF1_TBP-bd_dom 283 385
No external refs found!