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  5. XM_002502675.1

XM_002502675.1 (MICPUN_82714, 82714)


Aliases : MICPUN_82714, 82714

Description : Voltage-gated ion channel superfamily (CAV4)


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002502675.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre16.g667350 30778190, CAV6 No description available 0.02 OrthoFinder
Dusal.0502s00008.1 33199147 Ion transport domain [Interproscan]. 0.03 OrthoFinder
OT_04G02850.1 No alias Ion transport domain [Interproscan]. 0.04 OrthoFinder
OT_06G02060.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000397.1_cds_GFH11377.1_5854 HaLaN_06864, GFH11377 EF-hand domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 39 316
IPR005821 Ion_trans_dom 407 630
IPR005821 Ion_trans_dom 743 1019
IPR005821 Ion_trans_dom 1067 1311
No external refs found!