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  5. Cpa|evm.model.tig00022099.6

Cpa|evm.model.tig00022099.6 (tig00022099_g23808.t1)


Aliases : tig00022099_g23808.t1

Description : Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-D component


Gene families : OG_01_0003825 (OrthoFinder) Phylogenetic Tree(s): OG0003825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00022099.6
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Cre12.g513950 30792477, SUF4 Coenzyme metabolism.iron-sulfur cluster assembly... 0.02 OrthoFinder
OT_07G02790.1 No alias SUF system FeS cluster assembly, SufBD [Interproscan]. 0.02 OrthoFinder
Sro94_g048910.1 Contig150.g1681 UPF0051 protein slr0076 0.03 OrthoFinder
Transcript_contig_60548 60548 SUF system FeS cluster assembly, SufBD [Interproscan]. 0.01 OrthoFinder
Vocar.0006s0294.1 32893884 SUF system FeS cluster assembly, SufBD [Interproscan]. 0.02 OrthoFinder
XM_003058133.1 MicpuC2_33054, 33054 ATP-binding cassette superfamily 0.01 OrthoFinder
lcl|BLLF01000337.1_cds_GFH10687.1_5164 HaLaN_06046, GFH10687 Iron-sulfur cluster assembly protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0008616 queuosine biosynthetic process IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009119 ribonucleoside metabolic process IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046116 queuosine metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000825 SUF_FeS_clus_asmbl_SufBD 268 495
No external refs found!