1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002502643.1

XM_002502643.1 (MICPUN_58938, 58938)


Aliases : MICPUN_58938, 58938

Description : Set domain protein


Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002502643.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020710.90 tig00020710_g13355.t1 No description available 0.02 OrthoFinder
Cre03.g197700 30788134 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.05 OrthoFinder
Cre17.g746247 30782096 Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder
Cz02g16090.t1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
Cz02g21310.t1 No alias PWWP domain; PHD-finger; FY-rich, N-terminal; FY-rich,... 0.05 OrthoFinder
Cz07g29070.t1 No alias AWS domain; SET domain; Zinc finger, GATA-type [Interproscan]. 0.05 OrthoFinder
Cz14g21060.t1 No alias SET domain [Interproscan]. 0.03 OrthoFinder
EOD12158 No alias FY-rich, C-terminal; SET domain [Interproscan]. 0.03 OrthoFinder
OT_03G01110.1 No alias High mobility group box domain; Zinc finger, PHD-finger;... 0.03 OrthoFinder
OT_13G03070.1 No alias AWS domain; SET domain [Interproscan]. 0.07 OrthoFinder
PTI_01G11780.1 No alias SET domain; AWS domain [Interproscan]. 0.04 OrthoFinder
PTI_12G04100.1 No alias SET domain [Interproscan]. 0.01 OrthoFinder
PTI_29G00470.1 No alias Protein kinase domain; SET domain; Cyclin, N-terminal... 0.03 OrthoFinder
Sro2775_g336830.1 Contig927.g9706 Lysine N-methyltransferase, H3 lysine-4 specific 0.02 OrthoFinder
Sro72_g039840.1 Contig1459.g13383 36 and H4 lysine-20 specific 0.02 OrthoFinder
Sro84_g045070.1 Contig220.g2640 36 and H4 lysine-20 specific 0.02 OrthoFinder
Vocar.0044s0031.1 32896567 Zinc finger, CW-type; SET domain; AWS domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60593.1_4707 PRW60593 Histone-lysine N-methyltransferase ASHH2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 183 289
IPR001878 Znf_CCHC 812 827
IPR011124 Znf_CW 19 64
IPR006560 AWS_dom 133 169
No external refs found!