1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00022080.16

Cpa|evm.model.tig00022080.16 (tig00022080_g23800.t1)


Aliases : tig00022080_g23800.t1

Description : RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP41 component


Gene families : OG_01_0000382 (OrthoFinder) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00022080.16
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Sro2148_g316530.1 Contig3130.g24839 Complex component RRP41 0.02 OrthoFinder
Transcript_contig_56513 56513 Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_9190 9190 Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 22 152
No external refs found!