1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002502406.1

XM_002502406.1 (MICPUN_108235, 108235)


Aliases : MICPUN_108235, 108235

Description : JAB1/MPN/MOV34 metalloenzyme domain [Interproscan].


Gene families : OG_01_0003156 (OrthoFinder) Phylogenetic Tree(s): OG0003156_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002502406.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cre16.g676314 30777467, EIF3H Protein biosynthesis.translation... 0.14 OrthoFinder
Cz07g20080.t1 No alias JAB1/MPN/MOV34 metalloenzyme domain [Interproscan]. 0.08 OrthoFinder
Dusal.0040s00013.1 33197286 JAB1/MPN/MOV34 metalloenzyme domain [Interproscan]. 0.04 OrthoFinder
EOD30958 No alias JAB1/MPN/MOV34 metalloenzyme domain [Interproscan]. 0.06 OrthoFinder
OT_13G02980.1 No alias JAB1/MPN/MOV34 metalloenzyme domain [Interproscan]. 0.07 OrthoFinder
PTI_22G00390.1 No alias JAB1/MPN/MOV34 metalloenzyme domain [Interproscan]. 0.04 OrthoFinder
Sro1601_g285210.1 Contig4269.g32305 Factor 3 subunit H 0.07 OrthoFinder
XM_003056942.1 MicpuC2_49525, 49525 JAB1/MPN/MOV34 metalloenzyme domain [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57059.1_8795 PRW57059 Eukaryotic translation initiation factor 3 subunit H 0.07 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495525.1_1523 KAA8495525 Eukaryotic translation initiation factor 3 subunit H 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 20 126
No external refs found!