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  5. XM_002502171.1

XM_002502171.1 (MICPUN_100629, 100629)


Aliases : MICPUN_100629, 100629

Description : Voltage-gated ion channel superfamily


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002502171.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cz05g15090.t1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.03 OrthoFinder
Cz05g22050.t1 No alias Ion transport domain [Interproscan]. 0.05 OrthoFinder
Cz15g15200.t1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.02 OrthoFinder
Dusal.0081s00037.1 33198253 Ion transport domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold758.4 758.4 Cyclic nucleotide-binding domain [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1670.1 32885968 Ion transport domain; Cyclic nucleotide-binding domain... 0.02 OrthoFinder
XM_003059404.1 MicpuC2_40155, 40155 Voltage-gated ion channel superfamily 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 115 364
IPR000595 cNMP-bd_dom 462 555
No external refs found!