XM_002502093.1 (MICPUN_69395, 69395)

Aliases : MICPUN_69395, 69395

Description : Helicase, C-terminal; ATP-dependent DNA helicase RecQ, zinc-binding domain [Interproscan].

Gene families : OG_01_0000107 (OrthoFinder) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: XM_002502093.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020961.28 tig00020961_g16648.t1 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cz03g24160.t1 No alias Helicase, C-terminal; Transcription factor IIS,... 0.02 OrthoFinder
Dusal.0407s00008.1 33197886 Zinc finger, CCHC-type; Helicase, C-terminal [Interproscan]. 0.02 OrthoFinder
OT_03G01700.1 No alias Helicase, C-terminal; RQC domain; ATP-dependent DNA... 0.03 OrthoFinder
PTI_16G00860.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.03 OrthoFinder
Transcript_contig_2691 2691 Helicase, C-terminal; HRDC domain; RQC domain;... 0.01 OrthoFinder
XM_003057343.1 MicpuC2_10598, 10598 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 191 294
IPR032284 RecQ_Zn-bd 326 364
No external refs found!