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  5. XM_002501497.1

XM_002501497.1 (MICPUN_58213, 58213)


Aliases : MICPUN_58213, 58213

Description : Photosystem I subunit VI, chloroplast precursor (PSAH)


Gene families : OG_01_0006336 (OrthoFinder) Phylogenetic Tree(s): OG0006336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002501497.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Cre07.g330250 30775443, PSAH Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.05 OrthoFinder
Cz12g12230.t1 No alias Photosystem I PsaH, reaction centre subunit VI [Interproscan]. 0.03 OrthoFinder
Dusal.1048s00003.1 33194744 Photosystem I PsaH, reaction centre subunit VI [Interproscan]. 0.03 OrthoFinder
OT_15G01060.1 No alias Photosystem I PsaH, reaction centre subunit VI [Interproscan]. 0.02 OrthoFinder
Transcript_contig_61085 61085 Photosystem I PsaH, reaction centre subunit VI [Interproscan]. 0.01 OrthoFinder
Vocar.0031s0002.1 32890167 Photosystem I PsaH, reaction centre subunit VI [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01001538.1_cds_GFH19901.1_14378 HaLaN_16930, GFH19901 Photosystem I PsaH, reaction centre subunit VI [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56048.1_10293 PRW56048 Photosystem I reaction center subunit VI-chloroplastic-like 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
InterPro domains Description Start Stop
IPR004928 PSI_PsaH 8 131
No external refs found!