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  5. XM_002501477.1

XM_002501477.1 (MICPUN_58161, 58161)


Aliases : MICPUN_58161, 58161

Description : ARID DNA-binding domain [Interproscan].


Gene families : OG_01_0003441 (OrthoFinder) Phylogenetic Tree(s): OG0003441_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002501477.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Cz01g21070.t1 No alias Zinc finger, PHD-finger; ARID DNA-binding domain [Interproscan]. 0.03 OrthoFinder
XM_003057937.1 MicpuC2_39156, 39156 ARID DNA-binding domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001063.1_cds_GFH16869.1_11346 HaLaN_13381, GFH16869 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001606 ARID_dom 89 167
No external refs found!