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  5. XM_002500883.1

XM_002500883.1 (MICPUN_56911, 56911)


Aliases : MICPUN_56911, 56911

Description : Voltage-gated ion channel superfamily


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002500883.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.58 tig00000711_g3420.t1 Potassium channel KOR1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00000851.5 tig00000851_g4889.t1 Putative cyclic nucleotide-gated ion channel 8... 0.03 OrthoFinder
Cpa|evm.model.tig00021348.58 tig00021348_g20561.t1 Putative cyclic nucleotide-gated ion channel 8... 0.03 OrthoFinder
Cz05g22050.t1 No alias Ion transport domain [Interproscan]. 0.03 OrthoFinder
Cz15g15200.t1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.03 OrthoFinder
Dusal.0081s00037.1 33198253 Ion transport domain [Interproscan]. 0.02 OrthoFinder
EOD10747 No alias Cyclic nucleotide binding K+ channel [Ensembl]. 0.02 OrthoFinder
OT_13G00610.1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.07 OrthoFinder
SymbC1.scaffold1142.2 1142.2 Ion transport domain [Interproscan]. 0.03 OrthoFinder
Vocar.0021s0070.1 32895856 Ion transport domain; Cyclic nucleotide-binding domain... 0.03 OrthoFinder
Vocar.0082s0001.1 32886964 Cyclic nucleotide-binding domain [Interproscan]. 0.03 OrthoFinder
XM_002504550.1 MICPUN_61321, 61321 Voltage-gated ion channel superfamily 0.03 OrthoFinder
XM_003059489.1 MicpuC2_47550, 47550 Voltage-gated ion channel superfamily 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
BP GO:0010824 regulation of centrosome duplication IEP Enrichment
BP GO:0010826 negative regulation of centrosome duplication IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
CC GO:0036038 MKS complex IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046605 regulation of centrosome cycle IEP Enrichment
BP GO:0046606 negative regulation of centrosome cycle IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051494 negative regulation of cytoskeleton organization IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 57 333
IPR000595 cNMP-bd_dom 425 497
No external refs found!