1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002499625.1

XM_002499625.1 (MICPUN_107704, 107704)


Aliases : MICPUN_107704, 107704

Description : Zinc finger, GATA-type [Interproscan].


Gene families : OG_01_0000310 (OrthoFinder) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002499625.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001094.21 tig00001094_g6992.t1 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder
Cre03.g160700 30787182 No description available 0.02 OrthoFinder
Cz12g10200.t1 No alias Zinc finger, GATA-type [Interproscan]. 0.02 OrthoFinder
OT_07G03500.1 No alias Zinc finger, GATA-type [Interproscan]. 0.02 OrthoFinder
Vocar.0003s0248.1 32888910 Bromo adjacent homology (BAH) domain; Zinc finger,... 0.02 OrthoFinder
Vocar.0021s0143.1 32895882 Zinc finger, GATA-type [Interproscan]. 0.02 OrthoFinder
XM_003057111.1 MicpuC2_56004, 56004 Zinc finger, GATA-type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000083.1_cds_GFH07250.1_1727 HaLaN_02029, GFH07250 GATA-type domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58971.1_7208 PRW58971 GATA transcription factor 16 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495053.1_3583 KAA8495053 GATA transcription factor 11 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
InterPro domains Description Start Stop
IPR000679 Znf_GATA 391 422
No external refs found!