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  5. XM_002499567.1

XM_002499567.1 (MICPUN_79103, 79103)


Aliases : MICPUN_79103, 79103

Description : ATP-binding cassette superfamily


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002499567.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.84 tig00000158_g10189.t1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cpa|evm.model.tig00020684.9 tig00020684_g12858.t1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
OT_07G01620.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.04 OrthoFinder
SymbC1.scaffold6437.5 6437.5 ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 709 947
IPR011527 ABC1_TM_dom 46 321
IPR003439 ABC_transporter-like_ATP-bd 390 533
IPR003439 ABC_transporter-like_ATP-bd 1039 1187
No external refs found!