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  5. Cpa|evm.model.tig00021682.9

Cpa|evm.model.tig00021682.9 (tig00021682_g23099.t1)


Aliases : tig00021682_g23099.t1

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS7 component


Gene families : OG_01_0003112 (OrthoFinder) Phylogenetic Tree(s): OG0003112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021682.9
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre12.g498900 30792089, RPS7 Protein biosynthesis.cytosolic ribosome.small subunit... 0.34 OrthoFinder
Cz02g24040.t1 No alias Ribosomal protein S7e [Interproscan]. 0.23 OrthoFinder
Dusal.0024s00020.1 33202211 Ribosomal protein S7e [Interproscan]. 0.14 OrthoFinder
EOD37465 No alias Ribosomal protein S7e; High mobility group box domain... 0.04 OrthoFinder
OT_09G03160.1 No alias Ribosomal protein S7e [Interproscan]. 0.3 OrthoFinder
PTI_28G01270.1 No alias Ribosomal protein S7e [Interproscan]. 0.39 OrthoFinder
Sro730_g194010.1 Contig80.g833 40S ribosomal protein S7 0.38 OrthoFinder
SymbC1.scaffold1753.10 1753.10 Ribosomal protein S7e [Interproscan]. 0.06 OrthoFinder
TP02G05030.1 No alias Ribosomal protein S7e [Interproscan]. 0.29 OrthoFinder
Vocar.0006s0277.1 32894204 Ribosomal protein S7e [Interproscan]. 0.13 OrthoFinder
XM_002508754.1 MICPUN_91845, 91845 Ribosomal protein S7e [Interproscan]. 0.35 OrthoFinder
XM_003056772.1 MicpuC2_46695, 46695 Ribosomal protein S7e [Interproscan]. 0.14 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20375.1_5582 PRW20375 40S ribosomal S7 isoform A 0.23 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494704.1_3234 KAA8494704 40S ribosomal protein S7 0.19 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000554 Ribosomal_S7e 7 190
No external refs found!