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  5. lcl|BLLF01005074.1_cds_GFH30695.1_25172

lcl|BLLF01005074.1_cds_GFH30695.1_25172 (HaLaN_29591, GFH30695)


Aliases : HaLaN_29591, GFH30695

Description : Starch synthase, chloroplastic/amyloplastic


Gene families : OG_01_0000262 (OrthoFinder) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01005074.1_cds_GFH30695.1_25172
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
Cre04.g215150 30791328, SSS1 Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder
Cre12.g521700 30793339 Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder
Cre17.g721500 30782074 Carbohydrate metabolism.starch... 0.03 OrthoFinder
Vocar.0001s1467.1 32885239 Glycosyl transferase, family 1; Starch synthase,... 0.03 OrthoFinder
Vocar.0025s0172.1 32898226 Starch synthase, catalytic domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60501.1_4331 PRW60501 Granule-bound starch synthase chloroplastic amyloplastic 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 20 127
No external refs found!