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  5. lcl|BLLF01004768.1_cds_GFH30214.1_24691

lcl|BLLF01004768.1_cds_GFH30214.1_24691 (HaLaN_29020, GFH30214)


Aliases : HaLaN_29020, GFH30214

Description : Anaphase-promoting complex subunit 4, WD40 domain [Interproscan].


Gene families : OG_01_0002219 (OrthoFinder) Phylogenetic Tree(s): OG0002219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01004768.1_cds_GFH30214.1_24691
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
OT_13G01230.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Sro1924_g305740.1 Contig3525.g27254 WD repeat-containing protein 18 0.02 OrthoFinder
XM_002505320.1 MICPUN_68726, 68726 WD40 repeat [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33905.1_2949 PRW33905 ROOT INITIATION DEFECTIVE 3 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 24 88
No external refs found!