1. Home
  2. Species
  3. Haematococcus lacustris
  4. Sequence
  5. lcl|BLLF01004360.1_cds_GFH29467.1_23944

lcl|BLLF01004360.1_cds_GFH29467.1_23944 (HaLaN_28127, GFH29467)


Aliases : HaLaN_28127, GFH29467

Description : DNA-directed RNA polymerase


Gene families : OG_01_0004012 (OrthoFinder) Phylogenetic Tree(s): OG0004012_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01004360.1_cds_GFH29467.1_23944
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021493.49 tig00021493_g21888.t1 RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder
PTI_22G01800.1 No alias DNA-directed RNA polymerase, phage-type; DNA-directed... 0.04 OrthoFinder
Sro453_g146140.1 Contig1693.g15171 RNA polymerase 2, chloroplastic/mitochondrial 0.01 OrthoFinder
TP02G07610.1 No alias DNA-directed RNA polymerase, N-terminal; DNA-directed... 0.02 OrthoFinder
Transcript_contig_57975 57975 DNA-directed RNA polymerase, N-terminal [Interproscan]. 0.02 OrthoFinder
XM_003059239.1 MicpuC2_17826, 17826 DNA-directed RNA polymerase, phage-type; DNA-directed... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002092 DNA-dir_Rpol_phage-type 3 258
No external refs found!