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  5. Cpa|evm.model.tig00021590.9

Cpa|evm.model.tig00021590.9 (tig00021590_g22766.t1)


Aliases : tig00021590_g22766.t1

No description available


Gene families : OG_01_0000116 (OrthoFinder) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021590.9
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020807.20 tig00020807_g14073.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020943.47 tig00020943_g16290.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00021070.52 tig00021070_g17854.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021434.17 tig00021434_g21314.t1 No description available 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR025139 DUF4062 39 122
No external refs found!