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Aliases : HaLaN_27598, GFH29014
Description : Starch synthase, chloroplastic/amyloplastic
Gene families : OG_01_0000262 (OrthoFinder) Phylogenetic Tree(s): OG0000262_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01004140.1_cds_GFH29014.1_23491 | |
| Cluster | HCCA: Cluster_189 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre04.g215150 | 30791328, SSS1 | Enzyme classification.EC_2 transferases.EC_2.4... | 0.01 | OrthoFinder | |
| Cre06.g257050 | 30778710, GBS2 | Granule-bound starch synthase 1,... | 0.02 | OrthoFinder | |
| Cre17.g721500 | 30782074 | Carbohydrate metabolism.starch... | 0.05 | OrthoFinder | |
| Transcript_contig_89442 | 89442 | Starch synthase, catalytic domain; Glycosyl transferase,... | 0.02 | OrthoFinder | |
| Vocar.0001s1467.1 | 32885239 | Glycosyl transferase, family 1; Starch synthase,... | 0.04 | OrthoFinder | |
| Vocar.0025s0172.1 | 32898226 | Starch synthase, catalytic domain [Interproscan]. | 0.03 | OrthoFinder | |
| XM_002502897.1 | MICPUN_104862, 104862 | Glycosyltransferase family 5 protein (SSIA) | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0004329 | formate-tetrahydrofolate ligase activity | IEP | Enrichment |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Enrichment |
| MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0006096 | glycolytic process | IEP | Enrichment |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Enrichment |
| BP | GO:0006544 | glycine metabolic process | IEP | Enrichment |
| BP | GO:0006546 | glycine catabolic process | IEP | Enrichment |
| BP | GO:0006757 | ATP generation from ADP | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006811 | ion transport | IEP | Enrichment |
| BP | GO:0006812 | cation transport | IEP | Enrichment |
| BP | GO:0006813 | potassium ion transport | IEP | Enrichment |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0009063 | cellular amino acid catabolic process | IEP | Enrichment |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | Enrichment |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0015696 | ammonium transport | IEP | Enrichment |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Enrichment |
| BP | GO:0016054 | organic acid catabolic process | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Enrichment |
| MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Enrichment |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| BP | GO:0044282 | small molecule catabolic process | IEP | Enrichment |
| BP | GO:0046031 | ADP metabolic process | IEP | Enrichment |
| BP | GO:0046034 | ATP metabolic process | IEP | Enrichment |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Enrichment |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Enrichment |
| MF | GO:0050661 | NADP binding | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| MF | GO:0071949 | FAD binding | IEP | Enrichment |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| No external refs found! |