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Aliases : HaLaN_26485, GFH28065
Description : Helicase ATP-binding domain-containing protein
Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01003728.1_cds_GFH28065.1_22542 | |
| Cluster | HCCA: Cluster_261 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021623.13 | tig00021623_g23013.t1 | RNA biosynthesis.transcriptional activation.PHD finger... | 0.01 | OrthoFinder | |
| Cre03.g179300 | 30786668 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder | |
| Cre07.g325700 | 30774388 | ATP-dependent helicase BRM OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| Cre08.g377200 | 30773522 | CHD3-type chromatin-remodeling factor PICKLE... | 0.01 | OrthoFinder | |
| Cre16.g687301 | 30777125 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder | |
| Cz01g25030.t1 | No alias | Helicase, C-terminal; Chromo domain; Domain of unknown... | 0.02 | OrthoFinder | |
| Dusal.0024s00040.1 | 33202173 | SNF2-related, N-terminal domain [Interproscan]. | 0.01 | OrthoFinder | |
| Dusal.0035s00025.1 | 33196663 | SNF2-related, N-terminal domain [Interproscan]. | 0.01 | OrthoFinder | |
| EOD05386 | No alias | Chromo domain; Helicase, C-terminal; SNF2-related,... | 0.02 | OrthoFinder | |
| EOD25651 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.01 | OrthoFinder | |
| EOD27153 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.01 | OrthoFinder | |
| EOD36557 | No alias | SNF2-related, N-terminal domain [Interproscan]. | 0.02 | OrthoFinder | |
| OT_07G04400.1 | No alias | Helicase, C-terminal; ISWI, HAND domain; SNF2-related,... | 0.02 | OrthoFinder | |
| OT_11G00460.1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain;... | 0.01 | OrthoFinder | |
| PTI_10G00070.1 | No alias | Helicase, C-terminal; High mobility group box domain;... | 0.01 | OrthoFinder | |
| Sro1796_g298120.1 | Contig441.g5925 | Probable chromatin-remodeling complex ATPase chain | 0.01 | OrthoFinder | |
| Sro19_g013190.1 | Contig446.g5983 | CHD3-type chromatin-remodeling factor | 0.01 | OrthoFinder | |
| Sro847_g210300.1 | Contig4605.g34375 | CHD3-type chromatin-remodeling factor | 0.01 | OrthoFinder | |
| Transcript_contig_54441 | 54441 | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.01 | OrthoFinder | |
| Vocar.0032s0115.1 | 32893725 | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.01 | OrthoFinder | |
| Vocar.0053s0011.1 | 32887634 | Domain of unknown function DUF1086; Helicase,... | 0.02 | OrthoFinder | |
| XM_002502289.1 | MICPUN_58978, 58978 | SNF2 super family | 0.01 | OrthoFinder | |
| XM_003061952.1 | MicpuC2_51787, 51787 | SNF2 super family | 0.01 | OrthoFinder | |
| lcl|LHPG02000002.1_cds_PRW60614.1_4411 | PRW60614 | ATP-dependent helicase BRM | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005216 | ion channel activity | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
| BP | GO:0006468 | protein phosphorylation | IEP | Enrichment |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006811 | ion transport | IEP | Enrichment |
| MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Enrichment |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| MF | GO:0016301 | kinase activity | IEP | Enrichment |
| BP | GO:0016310 | phosphorylation | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| MF | GO:0017025 | TBP-class protein binding | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| BP | GO:0036211 | protein modification process | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |